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Dernière mise à jour : Mai 2018

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UMR ECOSYS - Ecologie fonctionnelle et écotoxicologie des agroécosystèmes

Peer-reviewed Journals 2019 - UMR EcoSys


Abichou, M., de Solan, B., Andrieu, B., 2019. Architectural response of wheat cultivars to row spacing reveals altered perception of plant density. Frontiers in Plant Science, 10, article 999, 14 p.

Aemig Q., Doussiet N., Danel A., Delgenès N., Jimenez J., Houot S., Patureau D., 2019. Organic micropollutants' distribution within sludge organic matter fractions explains their dynamic during sewage sludge anaerobic digestion followed by composting. Environmental Science and Pollution Research, 26, 6, 5820-5830.

Albasha R., Fournier C., Pradal C., Chelle M., Prieto J.A., Louarn G., Simonneau T., Lebon E., 2019. HydroShoot: a functional-structural plant model for simulating hydraulic structure, gas and energy exchange dynamics of complex plant canopies under water deficit - application to grapevine (Vitis vinifera L.). In Silico Plants, 1, no 1, article no diz007.

Azouz, N., Drouet, J.-L., Beekmann, M., Siour, Wichink Kruit, R., Cellier, P., 2019. Comparison of spatial patterns of ammonia concentration and dry deposition flux between a regional Eulerian chemistry-transport model and a local Gaussian plume model. Air Quality, Atmosphere & Health, 12, 6, 719-729.

Barillot, R., Chambon, C., Fournier, C., Combes, D., Pradal, C., Andrieu, B., 2019. Investigation of complex canopies with a functional–structural plant model as exemplified by leaf inclination effect on the functioning of pure and mixed stands of wheat during grain filling. Annals of Botany, 123, 727-742.

Bart S., Barraud A., Amosse J., Pery A.R.R., Mougin C., Pelosi C., 2019. Effects of two common fungicides on the reproduction of Aporrectodea caliginosa in natural soil. Ecotoxicology and Environmental Safety, 181, 518-524.

Bart, S., Pelosi, C., Barraud, A., Pery, A., Cheviron, N., Grondin, V., Mougin, C., Crouzet, O., 2019. Earthworms mitigate pesticide effects on soil microbial activities, Frontiers in Microbiology, 10, article 1535, 11 p.

Bart S., Pelosi C., Péry A.R.R., 2019. Towards a better understanding of the life cycle of the earthworm Aporrectodea caliginosa: New data and energy-based modelling. Pedobiologia, 77, article no 150592, 8 p.

Baveye, P., Otten, W., Kravchenko, A., 2019. Editorial: Elucidating Microbial Processes in Soils and Sediments: Microscale Measurements and Modeling. Frontiers in Environmental Science, 7, article 78, 5 p.

Baveye, P., 2019. Expanding the frontier in education research: Teacher education could help promote activities that affect students' ability to learn in the long-run. Frontiers in Education, 3 (Article 120), 4 p.

Baveye, P., Wander, M., 2019. The (bio)chemistry of soil humus and humic substances: Why is the “new view” still considered novel after more than 80 years?. Frontiers in Environmental Science, 7, article 27, 6 p.

Baveye, P., 2019. Book Review : Pedometrics: How relevant is it to the research on soil processes?. Frontiers in Environmental Science, 7, article 44, 4p.

Baveye P.C., Chalhoub M., Choquet P., Montagne D., 2019. Response: “Commentary: Is the focus on “ecosystems” a liability in the research on nature’s services?”. Frontiers in Ecology and Evolution Published online.

Bertrand C., Eckerter P.W., Ammann L., Entling M.H., Gobet E., Herzog F., Mestre L., Tinner W., Albrecht M., Garibaldi L., 2019. Seasonal shifts and complementary use of pollen sources by two bees, a lacewing and a ladybeetle species in European agricultural landscapes. Journal of Applied Ecology, in press. Published online.

Boixel, A.-L., Delestre, G., Legeay, J., Chelle, M., Suffert, F., 2019. Phenotyping Thermal Responses of Yeasts and Yeast-like Microorganisms at the Individual and Population Levels: Proof-of-Concept, Development and Application of an Experimental Framework to a Plant Pathogen. Microbial Ecology, 78 (1), 42-56.

Brun J., Salembier C., Loubet B., Jullien A., 2019. Designing collaborative research: the exploration of common purposes to foster the generation of cross-disciplinary projects. Proceedings of the Design Society: International Conference on Engineering Design (ICED19, Delft, NLD, 2019), 1, 1, 2219-2228.

Cambier, P., Michaud, A., Paradelo, R., Germain, M., Mercier, V., Guérin-Lebourg, A., Revallier, A., Houot, S., 2019. Trace metal availability in soil horizons amended with various urban waste composts during 17 years – Monitoring and modelling. Science of the Total Environment, 651 (Part 2), 2961-2974.

Cardinaël R., Chevallier T., Guenet B., Girardin C., Cozzi T., Pouteau V., Chenu C., 2019. Organic carbon decomposition rates with depth and contribution of inorganic carbon to CO2 emissions under a Mediterranean agroforestry system. European Journal of Soil Science.

Cardinaël, R., Hoeffner, K., Chenu, C., Chevallier, T., Béral, C., Dewisme, A., Cluzeau, D., 2019. Spatial variation of earthworm communities and soil organic carbon in temperate agroforestry. Biology and Fertility of Soils. 55, 2, 171-183.

Casal L., Durand P., Akkal-Corfini N., Benhamou C., Laurent F., Salmon-Monviola J., Ferrant S., Probst A., Probst J.L., Vertès F., 2019. Reduction of stream nitrate concentrations by land management in contrasted landscapes. Nutrient Cycling in Agroecosystems, 114, 1, 1-17.

Chen, S., Arrouays, D., Angers, D., Chenu, C., Barré, P., Martin, M., Saby, N., Walter, C., 2019. National estimation of soil organic carbon storage potential for arable soils: A data-driven approach coupled with carbon-landscape zones. Science of the Total Environment, 666, 355-367.,

Chenu, C., Angers, D. A., Barré, P., Derrien, D., Arrouays, D., Balesdent, J., 2019. Increasing organic stocks in agricultural soils: Knowledge gaps and potential innovations. Soil and Tillage Research, 188, 41-52.

Chiodini M.E., Perego A., Carozzi M., Acutis M., 2019. The Nitrification Inhibitor Vizura® Reduces N2O Emissions When Added to Digestate before Injection under Irrigated Maize in the Po Valley (Northern Italy). Agronomy, 9, 8. Article no 431, 17 p.

Ciadamidaro L., Parelle J., Tatin-Froux F., Moyen C., Durand A., Zappelini C., Morin-Crini N., Soupe D., Blaudez D., Chalot M., 2019. Early screening of new accumulating versus non-accumulating tree species for the phytomanagement of marginal lands. Ecological Engineering, 130, 147-156.

Clivot, H., Mouny, J.-C., Duparque, Dinh, Denoroy, P., Houot, S., Vertes, F., Trochard, R., Bouthier, A., Sagot, S., Mary, B., 2019. Modeling soil organic carbon evolution in long-term arable experiments with AMG model. Environmental Modelling and Software, 118, 99-113,

Cowan N., Levy P., Moring A., Simmons I., Bache C., Stephens A., Marinheiro J., Brichet J., Song L., Pickard A., McNeill C., McDonald R., Maire J., Loubet B., Voylokov P., Sutton M., Skiba U., 2019. Nitrogen use efficiency and N2O and NH3 losses attributed to three fertiliser types applied to an intensively managed silage crop. Biogeosciences, 16, 23, 4731-4745.

Crouzet, O., Consentino, L., Petraud, J. P., Marrauld, C., Aguer, J.-P., Bureau, S., Le Bourvellec, C., Touloumet, L., Berard, A., 2019. Soil photosynthetic microbial communities mediate aggregate stability: influence of cropping systems and herbicide use in an agricultural soil. Frontiers in Microbiology, 10, article 1319, 15 p.

Delon, C., Galy-Lacaux, Serça, Personne, E., Mougin, E., Adon, M., Le Dantec, V., Loubet, B., Fensholt, R., Tagesson, T., 2019. Modelling land–atmosphere daily exchanges of NO, NH3, and CO2 in a semi-arid grazed ecosystem in Senegal. Biogeosciences, 16 (9), 2049-2077.

Dollinger, J., Lin, C.-H., Udawatta, Pot, V., Benoit, P., Jose, S., 2019. Influence of agroforestry plant species on the infiltration of S-Metolachlor in buffer soils. Journal of Contaminant Hydrology, 225, 103498.

Dollinger, J., Jose, S., 2019. Correction to: Agroforestry for soil health. Agroforestry Systems, 93 (3), 1205-1205.

Domingues J.P., Gameiro A.H., Bonaudo T., Gabrielle B., Tichit M., 2019. Past intensification trajectories of livestock led to mixed social and environmental services. Animal, 1-11.

Domingues J.P., Gameiro A.H., Bonaudo T., Tichit M., Gabrielle B., 2019. Exploring trade-offs among indicators of performance and environmental impact in livestock areas. Regional Environmental Change, Published online. 11 p.

Ferrer Savall, J., Franqueville, D.Barbillon, P., Benhamou, C., Durand, P., Taupin, M.-L., Monod, H., Drouet, J.-L., 2019. Sensitivity analysis of spatio-temporal models describing nitrogen transfers, transformations and losses at the landscape scale. Environmental Modelling and Software, 111, 356-367.

Filipović, V., Coquet, Y., Gerke, H. H., 2019. Representation of Plot-Scale Soil Heterogeneity in Dual-Domain Effective Flow and Transport Models with Mass Exchange. Vadose Zone Journal, 18, 1, article no 180174 doi:10.2136/vzj2018.09.0174

Frazão J., de Goede R.G.M., Salánki T.E., Brussaard L., Faber J.H., Hedde M., Pulleman M.M., 2019. Responses of earthworm communities to crop residue management after inoculation of the earthworm Lumbricus terrestris (Linnaeus, 1758). Applied Soil Ecology, 142, 177-188.

Gaudio N., Escobar-Gutiérrez A.J., Casadebaig P., Evers J.B., Gérard F., Louarn G., Colbach N., Munz S., Launay M., Marrou H., Barillot R., Hinsinger P., Bergez J.-E., Combes D., Durand J.-L., Frak E., Pagès L., Pradal C., Saint-Jean S., Van Der Werf W., Justes E., 2019. Current knowledge and future research opportunities for modeling annual crop mixtures. A review. Agronomy for Sustainable Development, 39, article no 20, 20 p.

Geng, C., Zhuang, Y., Bergheaud, V., Garnier, P., Haudin, C.-S., 2019. Fate of 14C-acetyl sulfamethoxazole during the activated sludge process. Environmental Science and Pollution Research, 26, 10, 9832-9841.

Girard N., Aubin-Houzelstein G., Broussolle V., Chelle M., Lamothe L., Garcia F., Lutton E., Santé  A., 2019. Former ensemble doctorant et encadrant(s) à l’INRA, un institut de recherche pluridisciplinaire et finalisé. Natures Sciences Sociétés, 27, 3.

Gonzaga Gomez L., Loubet B., Lafouge F., Ciuraru R., Buysse P., Durand B., Gueudet J.-C., Fanucci O., Fortineau A., Zurfluh O., Decuq C., Kammer J., Duprix P., Bsaibes S., Truong F., Gros V., Boissard C., 2019. Comparative study of biogenic volatile organic compounds fluxes by wheat, maize and rapeseed with dynamic chambers over a short period in northern France. Atmospheric Environment, 214, article no 116855, 16 p.

Goulas, A., Sertillanges, N., Brimo, K., Garnier, P., Bergheaud, V., Dumeny, V., Benoit, P., Haudin, C.-S., 2019. Environmental availability of sulfamethoxazole and its acetylated metabolite added to soils via sludge compost or bovine manure. Science of the Total Environment, 651, 506-515.

Goulas A., Livoreil B., Grall N., Benoit P., Couderc-Obert C., Dagot C., Patureau D., Petit F., Laouénan C., Andremont A., 2019. Correction to: What are the effective solutions to control the dissemination of antibiotic resistance in the environment? A systematic review protocol. Environmental Evidence, 8, 1, article no 35, 1 p.

Hafner, S. D., Pacholski, A., Bittman, S., Carozzi, M., Chantigny, M., Genermont, S., Häni, C., Hansen, M. N., Huijsmans, J., Kupper, Misselbrook, T., Neftel, A., Nyord, Sommer, 2019. A flexible semi-empirical model for estimating ammonia volatilization from field-applied slurry. Atmospheric Environment, 199, 474-484.

Haro K., Ouarma I., Nana B., Bere A., Tubreoumya G.C., Kam S.Z., Laville P., Loubet B., Koulidiati J., 2019. Assessment of CH4 and CO2 surface emissions from Polesgo's landfill (Ouagadougou, Burkina Faso) based on static chamber method. Advances in Climate Change Research, in press; Published online.

Isch A., Montenach D., Hammel F., Ackerer P., Coquet Y., 2019. A comparative study of water and bromide transport in a bare loam soil using lysimeters and field plots. Water, 11, 6, 25.

Jiang R., Wang M.E., Chen W.P., Li X.Z., Balseiro-Romero M., Baveye P.C., 2019. Ecological risk of combined pollution on soil ecosystem functions: Insight from the functional sensitivity and stability. Environmental Pollution, 255, 10.

Joimel, S., Schwartz, Maurel, N., Magnus, Machon, N., Bel, J., Cortet, J., 2019. Contrasting homogenization patterns of plant and collembolan communities in urban vegetable gardens. Urban Ecosystems, 22 (3), 553-566. , 

Kemgue, A. T., Monga, O., Moto, S., Pot, V., Garnier, P., Baveye, P., Bouras, A., 2019. From spheres to ellipsoids: Speeding up considerably the morphological modeling of pore space and water retention in soils. Computers and Geosciences, 123, 20-37.

Kravchenko, A., Otten, W., Garnier, P., Pot, V., Baveye, P., 2019. Soil aggregates as biogeochemical reactors: Not a way forward in the research on soil‐atmosphere exchange of greenhouse gases. Global Change Biology, 25, 2205-2208

Kyulavski, V., Recous, S., Thuries, L., Paillat, J., Garnier, P., 2019. Investigating interactions between sugarcane straw and organic fertilizers recycled together in a soil using modelling of C and N mineralization. European Journal of Soil Science

Kyulavski, V., Recous, S., Garnier, P., Paillat, J.-M., Thuriès, 2019. Application of N Fertilizer to Sugarcane Mulches: Consequences for the Dynamics of Mulch Decomposition and CO2 and N2O Fluxes. BioEnergy Research, 12, 3, 484-496.

LeCarpentier, C., Barillot, R., Blanc, E., Abichou, M., Goldringer, I., Barbillon, P., Enjalbert, J., Andrieu, B., 2019. WALTer: a three-dimensional wheat model to study competition for light through the prediction of tillering dynamics. Annals of Botany, 123, 6, 961-975.

Lerch, T., Dignac, M.-F., Thevenot, M., Mchergui, C., Houot, S., 2019. Chemical changes during composting of plant residues reduce their mineralisation in soil and cancel the priming effect. Soil Biology and Biochemistry, 136, 107525,

Lichiheb, N., Myles, Personne, E., Heuer, M., Buban, M., Nelson, A. J., Koloutsou-Vakakis, S., Rood, M. J., Joo, E., Miller, Bernacchi, C., 2019. Implementation of the effect of urease inhibitor on ammonia emissions following urea-based fertilizer application at a Zea mays field in central Illinois: A study with SURFATM-NH3 model. Agricultural and Forest Meteorology, 269-270, 78-87.,

Liu S., Martre P., Buis S., Abichou M., Andrieu B., Baret F., 2019. Estimation of Plant and Canopy Architectural Traits Using the Digital Plant Phenotyping Platform. Plant Physiology, 181, 3, 881-890.

Loiseau, T., Chen, S., Mulder, V. L., Roman Dobarco, M., Richer de Forges, A., Lehmann, S., Bourennane, H., Saby, N., Martin, M., Vaudour, E., Gomez, C., Lagacherie, P., Arrouays, D., 2019. Satellite data integration for soil clay content modelling at a national scale. International Journal of Applied Earth Observation and Geoinformation, 82, article 101905.

Lutfalla, S., Barré, P., Bernard, S., Le Guillou, C., Alléon, Chenu, C., 2019. Multidecadal persistence of organic matter in soils: multiscale investigations down to the submicron scale. Biogeosciences, 16 (7), 1401-1410.

Massad R.S., Lathière J., Strada S., Perrin M., Personne E., Stéfanon M., Stella P., Szopa S., de Noblet-Ducoudré N., 2019. Reviews and syntheses: influences of landscape structure and land uses on local to regional climate and air quality. Biogeosciences, 16, 11, 2369-2408.

Moinet, G., Midwood, A., Hunt, Rumpel, C., Millard, Chabbi, A., 2019. Grassland Management Influences the Response of Soil Respiration to Drought. Agronomy, 9 (3), 124.,

Paradelo, R., Eden, M., Martínez, I., Keller, T., Houot, S., 2019. Soil physical properties of a Luvisol developed on loess after 15 years of amendment with compost. Soil and Tillage Research, 191, 207-215.

Paradelo, R., Lerch, T., Houot, S., Dignac, M.-F., 2019. Composting modifies the patterns of incorporation of OC and N from plant residues into soil aggregates. Geoderma, 353, 415-422.

Petitjean C., Philibert A., Manneville V., Amiaud B., Perrin A.-S., Charrier X., Gastal F., De Vliegher A., Willekens K., Montenach D., Houot S., Morvan T., Piutti S., 2019. Biomasse microbienne carbonée et activités enzymatiques : gammes de valeurs obtenues pour différents sols agricoles français et belges. Etude et Gestion des Sols, 26, 81-92.

Peyraud J.-L., Aubin J., Barbier M., Baumont R., Berri C., Bidanel J.-P., Citti C., Cotinot C., Ducrot C., Dupraz P., Faverdin P., Friggens N., Houot S., Nozières-Petit M.-O., Rogel-Gaillard C., Santé-Lhoutellier V., 2019. Quelle science pour les élevages de demain ? Une réflexion prospective conduite à l’INRA. INRA Productions Animales, 32, 2, 323-338.

Pronin E., Panettieri M., Torn K., Rumpel C., 2019. Stable carbon isotopic composition of dissolved inorganic carbon (DIC) as a driving factor of aquatic plants organic matter build-up related to salinity. Ecological Indicators, 99, 230-239.

Puche, N., Senapati, N., Flechard, C., Klumpp, K., Kirschbaum, M. U., Chabbi, A., 2019. Modeling Carbon and Water Fluxes of Managed Grasslands: Comparing Flux Variability and Net Carbon Budgets between Grazed and Mowed Systems. Agronomy, 9 (4), 183.

Ramanantenasoa Radomahaleo, M. M. J., Genermont, S., Gilliot, J.-M., Bedos, C., Makowski, D., 2019. Meta-modeling methods for estimating ammonia volatilization from nitrogen fertilizer and manure applications. Journal of Environmental Management, 236, 195-205.,

Reitzel, K., Bennett, Berger, N., Brownlie, W. J., Bruun, S., Christensen, M. L., Cordell, D., van Dijk, K., Egemose, Eigner, H., Glud, Grönfors, O., Hermann, L., Houot, S., et al, 2019. New Training to Meet the Global Phosphorus Challenge. Environmental Science & Technology, 53 (15), 8479-8481.

Rue M., Rees F., Simonnot M.O., Morel J.L., 2019. Phytoextraction of Ni from a toxic industrial sludge amended with biochar. Journal of Geochemical Exploration, 196, 173-181.

Rumpel, C., Amiraslani, F., Chenu, C., Garcia Cardenas, Kaonga, Koutika, Ladha, Madari, Shirato, Smith, Soudi, Soussana, J.-F., Whitehead, Wollenberg, 2019. The 4p1000 initiative: Opportunities, limitations and challenges for implementing soil organic carbon sequestration as a sustainable development strategy. Ambio10.1007/s13280-019-01165-2

Rumpel, C., Amiraslani, F., Chenu, C., Cardenas, M. G., Kaonga, M., Koutika, L.-S., Ladha, J., Madari, B., Shirato, Y., Smith, P., Soudi, B., Soussana, J.-F., Whitehead, D., Wollenberg, E., 2019. Response to “The “4p1000” initiative: A new name should be adopted” by Baveye and White, 2019. Ambio, 10.1007/s13280-019-01209-7

Saba, D., Manouchehri, N., Besançon, S., El Samad, O., Rana Baydoun, Bou Khozam, R., Nafeh Kassir, L., Kassouf, A., Chebib, H., Ouaini, N., Cambier, P., 2019. Bioaccessibility and radioisotopes of lead in soils around a fertilizer industry in Lebanon . Environmental Geochemistry and Health, 41(6), 2749-2762,

Saba D., Manouchehri N., Besancon S., El Samad O., Bou Khozam R., Nafeh Kassir L., Kassouf A., Chebib H., Ouaini N., Cambier P., 2019. Bioaccessibility of lead in Dittrichia viscosa plants and risk assessment of human exposure around a fertilizer industry in Lebanon. Journal of Environmental Management, 250, article no 109537, 8 p. Published online.

Sadet-Bourgeteau S., Houot S., Karimi B., Mathieu O., Mercier V., Montenach D., Morvan T., Sappin-Didier V., Watteau F., Nowak V., Dequiedt S., Maron P.-A., 2019. Microbial communities from different soil types respond differently to organic waste input. Applied Soil Ecology, 143, 70-79.

Sirami C., Gross N., Bosem Baillod A., Bertrand C., et al, 2019. Increasing crop heterogeneity enhances multitrophic diversity across agricultural regions. PNAS, 116 33, 16442-16447.

Smith P., Soussana J.F., Angers D., Schipper L., Chenu C., Rasse D.P., Batjes N.H., van Egmond F., McNeill S., Kuhnert M., et al, 2019. How to measure, report and verify soil carbon change to realise the potential of soil carbon sequestration for atmospheric greenhouse gas removal. Global Change Biology, in press. Published online.

Soucémarianadin L., Cécillon L., Chenu C., Baudin F., Nicolas M., Girardin C., Delahaie A., Barré P., 2019. Heterogeneity of the chemical composition and thermal stability of particulate organic matter in French forest soils. Geoderma, 342, 65-74.

​Stella, P., Loubet, B., de Berranger, C., Charrier, X., Ceschia, E., Gerosa, G., Finco, A., Lamaud, E., Serça, D., George, C., Ciuraru, R., 2019. Soil ozone deposition: Dependence of soil resistance to soil texture. Atmospheric Environment, 199, 202-209.

Tuzet A.Rahantaniaina M.S., Noctor G., 2019. Analyzing the Function of Catalase and the Ascorbate–Glutathione Pathway in H2O2 Processing: Insights from an Experimentally Constrained Kinetic Model. Antioxidants and Redox Signaling, 30, 9.

Vaudour, E., Gomez, C., Fouad, Y., Lagacherie, P., 2019. Sentinel-2 image capacities to predict common topsoil properties of temperate and Mediterranean agroecosystems. Remote Sensing of Environment, 223, 21-33,

Vaudour E., Gomez C., Loiseau T., Baghdadi N., Loubet B., Arrouays D., Ali L., Lagacherie P., 2019. The Impact of Acquisition Date on the Prediction Performance of Topsoil Organic Carbon from Sentinel-2 for Croplands. Remote Sensing, 11, 18, article no 2143, 17 p.

Vigan A., Hassouna M., Guingand N., Brame C., Edouard N., Eglin T., Espagnol S., Eugène M., Génermont S., Lagadec S., Lorinquer E., Loyon L., Ponchant P., Robin P., 2019. Data paper : Development of a database to collect emission values for livestock systems. Journal of Environment Quality, 48, 6, 1899-1906.

Von Cossel, M., Lewandowski, Elbersen, B., Staritsky, Van Eupen, Iqbal, Y., Mantel, S., Scordia, D., Testa, Cosentino, Maliarenko, O., Eleftheriadis, I., Zanetti, F., Monti, Lazdina, D., Neimane, Lamy, I., Ciadamidaro, L., Sanz, M., Esteban Carrasco, Ciria, McCallum, I., Trindade, L. M., Van Loo, E. N., Elbersen, W., Fernando, A. L., Papazoglou, E. G., Alexopoulou, 2019. Marginal Agricultural Land Low-Input Systems for Biomass Production. Energies, 12 (16), article no 3123, 25 p.

Wohlfahrt, J., Frechaud, F., Gabrielle, B., Godard, C., Kurek, B., Loyce, C., Therond, O., 2019. Characteristics of bioeconomy systems and sustainability issues at the territorial scale. A review. Journal of Cleaner Production, 232, 898-909.