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Last update: May 2021

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Publications

2022

Pinto AA, Barúa JE, Almeida MO, Viaud M, Zorrilla D, Collado IG, Macías-Sánchez AJ, Durán-Patrón R. Structural and biosynthetic studies of botrycinereic acid, a new cryptic metabolite from the fungus Botrytis cinerea. Bioorg Chem. 2022 Jun 20;127:105979. [DOI]

Simon A., Mercier A., Gladieux P., Poinssot B., Walker AS, Viaud V. Botrytis cinerea strains infecting grapevine and tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs [BioRXIV]

Molinelli HR, Liu M, O'Connell RJ, Nielsen ME (2022) Plant SYP12 syntaxins mediate an evolutionarily conserved general immunity to filamentous pathogens. eLife 2022;11:e73487 [DOI]

Rutter BD, Chu TT, Dallery JF, Zajt KK, O'Connell RJ, Innes RW. The development of extracellular vesicle markers for the fungal phytopathogen Colletotrichum higginsianum. J Extracell Vesicles. 2022 May;11(5):e12216. [DOI]

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2021

Takahara H, Yamaguchi S, Omura N, Nakajima S, Otoku K, Tanaka S, Ogura K, Kleemann J and O’Connell R (2021) The Colletotrichum higginsianum secreted effector protein ChEC91 induces plant cell death. Journal of General Plant Pathology 87: 344-353. [DOI]

Rouxel T, Genin S, Viaud M (2021). Effecteurs des agents phytopathogènes : à la croisée des chemins entre manipulation et induction des réactions de défense des plantes. In: “L'immunité des plantes - Pour des cultures résistantes aux maladies ». C Lannou, D Roby, V Ravigné, M Hannachi, B Moury eds. Quae. Prix Roberval 2021 dans la catégorie « Enseignement supérieur » [link]

Moraga J, Izquierdo-Bueno Reina I, Pinedo C, Hernández-Galán R, Viaud M, Collado IG. Impairment of botrydial production in Botrytis cinerea allows the isolation of undescribed polyketides and reveals new insights into the botcinins biosynthetic pathway. Phytochemistry. 2021 Mar;183:112627. [DOI]

Clairet C, Lapalu N, Simon A, Soyer JA, Viaud M, Zehraoui E, Dalmais B, Fudal I, Ponts N. Nucleosome patterns in four plant pathogenic fungi with contrasted genome structures. [BioRXIV]

Mercier A, Simon A, Lapalu N, Giraud T, Bardin M, Walker AS, Viaud M, Gladieux P. Population Genomics Reveals Molecular Determinants of Specialization to Tomato in the Polyphagous Fungal Pathogen Botrytis cinerea. Phytopathology. 2021 Apr 8. Epub ahead of print. [DOI] [BioRXIV]

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2020

Suárez I, González-Rodríguez VE, Viaud M, Garrido C, Collado IG. Identification of the sesquiterpene cyclase entailed in the biosynthesis of (+)-4-epi-eremophil-9-en-11-ol derivatives isolated from Botrytis cinerea. ACS Chem Biol. 2020 Sep 21. doi: 10.1021/acschembio.0c00561. Epub ahead of print. PMID: 32955237. [DOI]

Dallery JF, Zimmer M, Halder V, Suliman M, Pigné S, Le Goff G, Gianniou D, Trougakos IP, Ouazzani J, Gasperini D, O'Connell RJ. Inhibition of jasmonate-mediated plant defences by the fungal metabolite higginsianin B. J Exp Bot. 2020 Feb 1. [DOI]

Vignatti P, Gonzalez ME, Jofré EC, Bolívar-Anillo HJ, Moraga J, Viaud M, Collado IG, Pieckenstain FL. Botrydial confers Botrytis cinerea the ability to antagonize soil and phyllospheric bacteria. Fungal Biol. 2020 Jan;124(1):54-64. doi: 10.1016/j.funbio.2019.11.003. Epub 2019 Nov 15. [DOI]

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2019

de Vallée A, Bally P, Bruel C, Chandat L, Choquer M, Dieryckx C, Dupuy JW, Kaiser S, Latorse MP, Loisel E, Mey G, Morgant G, Rascle C, Schumacher J, Simon A, Souibgui E, Viaud M, Villalba F, Poussereau N (2019). A Similar Secretome Disturbance as a Hallmark of Non-pathogenic Botrytis cinerea ATMT-Mutants? Frontiers in Microbiology. [DOI]

Kilani J, Davanture M, Simon A, Zivy M, Fillinger S (2019). Comparative quantitative proteomics of osmotic signal transduction mutants in Botrytis cinerea explain mutant phenotypes and highlight interaction with cAMP and Ca2+ signalling pathways. J Proteomics. 2019 Nov 13;212:103580. [DOI]

Mercier A, Carpentier F, Duplaix C, Auger A, Pradier J-M, Viaud M, Gladieux P, Walker A-S (2019). The polyphagous plant pathogenic fungus Botrytis cinerea encompasses host‐specialized and generalist populations. Environmental microbiology. DOI : 10.1111/1462-2920.14829 [DOI]

Dallery J-F, Adelin E, Le Goff G, Pigné S, Auger A, Ouazzani J, O'Connell RJ (2019). H3K4 trimethylation by CclA regulates pathogenicity and the production of three families of terpenoid secondary metabolites in Colletotrichum higginsianum. Molecular Plant Pathology. DOI: 10.1111/mpp.12795 [DOI]

Porquier A, Moraga J, Morgant G, Dalmais B, Simon A, Sghyer H, Collado IG, Viaud M. (2019). Botcinic acid biosynthesis in Botrytis cinerea relies on a subtelomeric gene cluster surrounded by relics of transposons and is regulated by the Zn2Cys6 transcription factor BcBoa13. Current Genetics. DOI: 10.1007/s00294-019-00952-4 [DOI]

Dallery J-F, Le Goff G, Adelin E, Iorga BI, Pigné S, O’Connell RJ, Ouazzani J (2019). Deleting a chromatin remodeling gene increases the diversity of secondary metabolites produced by Colletotrichum higginsianum. Journal of Natural Products. DOI: 10.1021/acs.jnatprod.8b00796 [DOI]

Collemare J, O'Connell RJ, Lebrun M-H (2019). Non-proteinaceous effectors: the terra incognita of plant-fungal interactions. New Phytologist. DOI: 10.1111/nph.15785 [DOI]

Anasontzis GE,  Lebrun M-H,  Haon M,  Champion C,  Kohler A, Lenfant N, Martin F, O’Connell RJ, Riley R, Grigoriev IV, Henrissat B, Berrin J-G, Rosso M-N (2019). Broad‐specificity GH131 β‐glucanases are a hallmark of Fungi and Oomycetes that colonise plants. Environmental Microbiology DOI: 10.1111/1462-2920.14596 [DOI

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2018

Robin GP, Kleemann J, Neumann U, Cabre L, Dallery J-F, Lapalu N, O’Connell RJ. 2018. Subcellular localization screening of Colletotrichum higginsianum effector candidates identifies fungal proteins targeted to plant peroxisomes, Golgi bodies and microtubules. Frontiers in Plant Science, 02 May 2018 [DOI]

Izquierdo-Bueno I, González-Rodríguez VE, Simon A, Dalmais B, Pradier JM, Le Pêcheur P, Mercier A, Walker AS, Garrido C, Collado IG, Viaud M. (2018) Biosynthesis of abscisic acid in fungi: Identification of a sesquiterpene cyclase as the key enzyme in Botrytis cinerea. Environ Microbiol. 2018 Apr 30. [DOI]

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2017

J.-F. Dallery, N. Lapalu, A. Zampounis, S. Pigné, I. Luyten, J. Amselem, A. H. J. Wittenberg, S. Zhou, M. V. de Queiroz, G. P. Robin, A. Auger, M. Hainaut, B. Henrissat, K.-T. Kim, Y.-H. Lee, O. Lespinet, D. C. Schwartz, M. R. Thon, and R. J. O’Connell, (2017), Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters, BMC Genomics, vol. 18, no. 1, p. 667 [DOI]

Quijada-Morin N, Garcia F, Lambert K, Walker AS, Tiers L, Viaud M, Sauvage FX, Hirtz C, Saucier C. (2017). Strain effect on extracellular laccase activities from Botrytis. Australian Journal of Grape and Wine Research. [DOI]

J. Acevedo-Garcia, K. Gruner, A. Reinstädler, A. Kemen, E. Kemen, L. Cao, F. L. W. Takken, M. U. Reitz, P. Schäfer, R. J. O’Connell, S. Kusch, H. Kuhn, and R. Panstruga, (2017), The powdery mildew-resistant Arabidopsis mlo2 mlo6 mlo12 triple mutant displays altered infection phenotypes with diverse types of phytopathogens, Sci. Rep., vol. 7, no. 1, p. 9319 [DOI]

Franco Dos Santos G, Moraga J, Takahashi JA, Viaud M, Hanson JR, Hernández Galán R, Collado IG. (2017). The formation of sesquiterpenoid presilphiperfolane and cameroonane metabolites in the Bcbot4 null mutant of Botrytis cinerea. Org Biomol Chem. 2017 Jun 27;15(25):5357-5363. [DOI]

Brandhoff B, Simon A, Dornieden A, Schumacher J. (2017). Regulation of conidiation in Botrytis cinerea involves the light-responsive transcriptional regulators BcLTF3 and BcREG1. Curr Genet. 2017 Apr 5. [DOI]

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2016

Porquier A, Morgant G, Moraga J, Dalmais B, Luyten I, Simon A, Pradier JM, Amselem J, Collado IG, Viaud M. (2016). The botrydial biosynthetic gene cluster of Botrytis cinerea displays a bipartite genomic structure and is positively regulated by the putative Zn(II)2Cys6 transcription factor BcBot6. Fungal Genet Biol. 2016 Oct 6. pii: S1087-1845(16)30111-6. [DOI]

Zampounis A,Pigné S, Dallery J-F, Wittenberg AHJ, Zhou S, Schwartz DC, Thon MR, O’Connell RJ (2016) Genome sequence and annotation of Colletotrichum higginsianum, causal agent of Crucifer Anthracnose Disease. Genome Announcements4: e00821-16 [DOI]

Moraga J, Dalmais B, Izquierdo-Bueno I, Aleu J, Hanson JR, Hernández-Galán R, Viaud M, Collado IG. (2016). Genetic and molecular basis of botrydial biosynthesis. Connecting cytochrome P450-encoding genes to biosynthetic intermediates. ACS Chem Biol. 2016 Aug 16. [DOI]

Cohrs KC, Simon A, Viaud M, Schumacher J. (2016). Light governs asexual differentiation in the grey mould fungus Botrytis cinerea via the putative transcription factor BcLTF2. Environ Microbiol. 2016 Jun 27. [DOI]

Collado IG, Viaud M. Secondary metabolism in Botrytis cinerea: Combining genomic and metabolomic approaches (2016). In: Botrytis – the fungus, the pathogen and its management in agricultural systems. S Fillinger & Y Elad eds. Springer. [link]

Viaud M, Schumacher J, Porquier A, Simon A. (2016). Regulation of secondary metabolism in the grey mould fungus Botrytis cinerea. In : “Host - Pathogen Interaction: Microbial Metabolism, Pathogenicity and Antiinfectives, Part B: Adaptation of microbial metabolism in host/fungus-interactions”. G Unden, E Thines & A Schüffler eds. Wiley-Blackwell. [link]

Takahara H, Hacquard S, Kombrink A, Hughes HB, Halder V, Robin GP, Hiruma K, Neumann U, Shinya T, Kombrink E, Shibuya N, Thomma BPHJ, O’Connell RJ (2016)  Colletotrichum higginsianum extracellular LysM proteins play dual roles in appressorial function and suppression of chitin-triggered plant immunity. New Phytologist211: 1323-1337 [DOI]

Pinedo C, Moraga J, Barua J, González-Rodríguez VE, Aleu J, Duran R, Macías Sánchez AJ, Hanson JR, Viaud M, Hernández-Galán R, Garrido C, Collado IG. (2016). Chemically-induced cryptic sesquiterpenoids and expression of sesquiterpene cyclases in Botrytis cinerea revealed new sporogenic (+)-4-epieremophil-9-en-11-ols. ACS Chem Biol. 2016 May 20;11(5):1391-400.[DOI]

Hacquard S, Kracher B, Hiruma K, Münch PC, Garrido-Oter R, Thon MR, Weimann A, Damm U, Dallery J-F, Hainaut M, Henrissat B, Lespinet O, Sacristán S, van Themaat EVL, Kemen E, McHardy AC, Schulze-Lefert P, O’Connell RJ (2016) Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. Nature Communications7:11362 [DOI]

Hiruma K, Gerlach N, Sacristán N, Nakano RT, Hacquard S, Kracher B, Neumann U, Ramírez D, Bucher M, O’Connell RJ, Schulze-Lefert P (2016) Root endophyte Colletotrichum tofieldiae confers plant fitness benefits that are phosphate status-dependent. Cell165: 1-11 [DOI]

Zhang L, Lubbers RJ, Simon A, Stassen JH, Vargas Ribera PR, Viaud M, van Kan JA. (2016). A novel Zn2 Cys6 transcription factor BcGaaR regulates D-galacturonic acid utilization in Botrytis cinerea. Mol Microbiol. 2016 Apr;100(2):247-62. [DOI]

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2015

Kelloniemi J, Trouvelot S, Héloir MC, Simon A, Dalmais B, Frettinger P, Cimerman A, Fermaud M, Roudet J, Baulande S, Bruel C, Choquer M, Couvelard L, Duthieuw M, Ferrarini A, Flors V, Le Pêcheur P, Loisel E, Morgant G, Poussereau N, Pradier JM, Rascle C, Tdra L, Poinssot B, Viaud M (2015). Analysis of the molecular dialogue between gray mold (Botrytis cinerea) and grapevine (Vitis vinifera) reveals a clear shift in defense mechanisms during berry ripening. Mol Plant Microbe Interact. 2015 Nov;28(11):1167-80. [DOI]

Medema MH, Kottmann R, Yilmaz P, Cummings M, Biggins JB, Blin K, de Bruijn I, Chooi YH, Claesen J, Coates RC, Cruz-Morales P, Duddela S, Düsterhus S, Edwards DJ, Fewer DP, Garg N, Geiger C, Gomez-Escribano JP, Greule A, Hadjithomas M, Haines AS, Helfrich EJ, Hillwig ML, Ishida K, Jones AC, Jones CS, Jungmann K, Kegler C, Kim HU, Kötter P, Krug D, Masschelein J, Melnik AV, Mantovani SM, Monroe EA, Moore M, Moss N, Nützmann HW, Pan G, Pati A, Petras D, Reen FJ, Rosconi F, Rui Z, Tian Z, Tobias NJ, Tsunematsu Y, Wiemann P, Wyckoff E, Yan X, Yim G, Yu F, Xie Y, Aigle B, Apel AK, Balibar CJ, Balskus EP, Barona-Gómez F, Bechthold A, Bode HB, Borriss R, Brady SF, Brakhage AA, Caffrey P, Cheng YQ, Clardy J, Cox RJ, De Mot R, Donadio S, Donia MS, van der Donk WA, Dorrestein PC, Doyle S, Driessen AJ, Ehling-Schulz M, Entian KD, Fischbach MA, Gerwick L, Gerwick WH, Gross H, Gust B, Hertweck C, Höfte M, Jensen SE, Ju J, Katz L, Kaysser L, Klassen JL, Keller NP, Kormanec J, Kuipers OP, Kuzuyama T, Kyrpides NC, Kwon HJ, Lautru S, Lavigne R, Lee CY, Linquan B, Liu X, Liu W, Luzhetskyy A, Mahmud T, Mast Y, Méndez C, Metsä-Ketelä M, Micklefield J, Mitchell DA, Moore BS, Moreira LM, Müller R, Neilan BA, Nett M, Nielsen J, O'Gara F, Oikawa H, Osbourn A, Osburne MS, Ostash B, Payne SM, Pernodet JL, Petricek M, Piel J, Ploux O, Raaijmakers JM, Salas JA, Schmitt EK, Scott B, Seipke RF, Shen B, Sherman DH, Sivonen K, Smanski MJ, Sosio M, Stegmann E, Süssmuth RD, Tahlan K, Thomas CM, Tang Y, Truman AW, Viaud M, Walton JD, Walsh CT, Weber T, van Wezel GP, Wilkinson B, Willey JM, Wohlleben W, Wright GD, Ziemert N, Zhang C, Zotchev SB, Breitling R, Takano E, Glöckner FO (2015). Minimum Information about a Biosynthetic Gene cluster. Nat Chem Biol. 2015 Aug 18;11(9):625-31. [DOI]

Kubo Y, Fujihara N, Harata K, Neumann U, Robin GP, O’Connell R. (2015) Colletotrichum orbiculare FAM1 encodes a novel Woronin body-associated Pex22 peroxin required for appressorium-mediated plant infection. mBio 6: e01305-15 [DOI]

Viefhues A, Schlathoelter I, Simon A, Viaud M, Tudzynski P (2015). Unravelling the function of the response regulator BcSkn7 in the stress signaling network of Botrytis cinerea. Eukaryot Cell. 2015 Jul;14(7):636-51. [DOI]

Schumacher J, Simon A, Cohrs KC, Traeger S, Porquier A, Dalmais B, Viaud M, Tudzynski B (2015). The VELVET complex in the gray mold fungus Botrytis cinerea: impact of BcLAE1 on differentiation, secondary metabolism and virulence. Mol Plant Microbe Interact. 2015 Jun;28(6):659-74. [DOI]

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2014

Damm U, O’Connell RJ, Crous PW, Groenewald JZ. (2014) The Colletotrichum destructivum species complex – hemibiotrophic pathogens of forage and field crops. Studies in Mycology 79: 49-84. [DOI]

Kim H, O'Connell R, Maekawa-Yoshikawa M, Uemura T, Neumann U, Schulze-Lefert P. (2014) The powdery mildew resistance protein RPW8.2 is carried on VAMP721/722 vesicles to the extrahaustorial membrane of haustorial complexes. Plant Journal 79: 835-847. [DOI]

Hahn M, Viaud M, van Kan J (2014). The Genome of Botrytis cinerea, a Ubiquitous Broad Host Range Necrotroph. R. A. Dean et al. (eds.), Genomics of Plant-Associated Fungi and Oomycetes: Dicot Pathogens, Springer-Verlag Berlin Heidelberg 2014. [DOI]

Schumacher J, Simon A, Cohrs KC, Viaud M, Tudzynski P (2014). The Transcription Factor BcLTF1 Regulates Virulence and Light Responses in the Necrotrophic Plant Pathogen Botrytis cinerea. PLoS Genet 10(1): e1004040. [DOI]

Doehlemann G, Requena N, Patrick Schaefer P, Brunner F, O'Connell R, Parker JE (2014) Reprogramming of plant cells by filamentous plant-colonizing microbes. New Phytologist. [DOI]

Crouch J, O’Connell R, Gan P, Buiate E, Torres M, Beirn L, Shirasu K, Vaillancourt L (2014) The Genomics of Colletotrichum. In Genomics of Plant-Associated Fungi: Monocot Pathogens, pp. 69-102, Ed. by RA Dean, A Lichens-Park, C Kole, Springer-Verlag (Berlin-Heidelberg). [DOI]

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2013

Simon A, Dalmais B, Morgant G, Viaud M (2013). Screening of a Botrytis cinerea one-hybrid library reveals a Cys(2)His(2) transcription factor involved in the regulation of secondary metabolism gene clusters. Fungal Genet Biol. 2013 Mar;52:9-19. [DOI]

Massaroli M, Moraga J, Bastos Borges K, Ramírez-Fernández J, Viaud M, González Collado I, Durán-Patrón R, Hernández-Galán R (2013). A shared biosynthetic pathway for botcinins and botrylactones revealed through gene deletions. Chembiochem. 2013 Jan 2;14(1):132-6. [DOI]

Schumacher J, Gautier A, Morgant G, Studt L, Ducrot PH, Le Pêcheur P, Azeddine S, Fillinger S, Leroux P, Tudzynski B, Viaud M (2013). A Functional Bikaverin Biosynthesis Gene Cluster in Rare Strains of Botrytis cinerea Is Positively Controlled by VELVET. PLoS ONE 8(1): e53729. [DOI]

Gan, P., Ikeda, K., Irieda, H., Narusaka, M., O’Connell, R.J., Narusaka, Y., Takano, Y., Kubo, Y. & Shirasu, K. (2013) Comparative genomic and transcriptomic analyses reveal the hemibiotrophic stage shift of Colletotrichum fungi. New Phytologist 197: 1236-1249. [DOI]

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2012

O’Connell, R.J., Thon, M.R., Hacquard, S., Amyotte, S.G., Kleemann, J., Torres, M.F., Damm, U., Buiate, E.A., Epstein, L., , Alkan, N., Altmüller, J., Alvarado‐Balderrama, L., Bauser, C.L., Becker, C., Birren, B.W., Chen, Z., Choi, J., Crouch, J.A., Duvick, J.P., Farman, M.L., Gan, P., Heiman, D., Henrissat, B., Howard, R.J., Kabbage, M., Koch, C., Kubo, Y., Law, A.D., Lebrun, M.‐H., Lee, Y.‐H., Miyara, I., Moore, N., Neumann, U., Panaccione, D.G., Panstruga, R., Place, M., Proctor, R.H., Prusky, D., Rech, G., Reinhardt, R., Rollins, J.A., Rounsley, S., Schardl, C.L., Schwartz, D.C., Shenoy, N., Shirasu, K., Sikhakolli, U.R., Stüber, K., Sukno, S.A., Sweigard, J.A., Takano, Y., Takahara, H., Trail, F., van der Does, H.C., Voll, L.M., Will, I., Young, S., Zeng, Q., Zhang, J., Zhou, S., Dickman, M.B., Schulze‐Lefert, P., Ver Loren van Themaat, E., Ma, L.‐J., & Vaillancourt, L.J. (2012) Life‐style transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. Nature Genetics44: 1060‐1065. [DOI]

Antal Z, Rascle C, Cimerman A, Viaud M, Billon-Grand G, Choquer M., Bruel C (2012). The Homeobox BcHOX8 Gene in Botrytis Cinerea Regulates Vegetative Growth and Morphology. PLoS One 2012;7(10): e48134. [DOI]

Schumacher J, Pradier JM, Simon A, Traeger S, Moraga J, Collado IG, Viaud M, Tudzynski B (2012). Natural Variation in the VELVET Gene bcvel1 Affects Virulence and Light-Dependent Differentiation in Botrytis cinerea. PLoS One. 2012;7(10):e47840. [DOI]

Aguileta G, Lengelle J, Chiapello H, Giraud T, Viaud M, Fournier E, Rodolphe F, Marthey S, Ducasse A, Gendrault A, Poulain J, Wincker P, Gout L (2012). Genes under positive selection in a model plant pathogenic fungus, Botrytis. Infect Genet Evol. 2012 Jul;12(5):987-96. [DOI]

Kleemann, J., Rincon‐Rivera, L.‐J., Takahara, H., Neumann, U., Ver Loren van Themaat, E., van der Does, H.C., Hacquard, S., Stüber, K., Will, I., Schmalenbach, W., Schmelzer, E. & O’Connell, R.J. (2012) Sequential delivery of host‐induced virulence effectors by appressoria and intracellular hyphae of the phytopathogen Colletotrichum higginsianum. Plos Pathogens8: e1002643. [DOI]

Temme N, Oeser B, Massaroli M, Heller J, Simon A, González Collado I, Viaud M, Tudzynski P (2012). BcAtf1, a global regulator, controls various differentiation processes and phytotoxin production in Botrytis cinerea. Mol Plant Pathol. 2012 Feb 1. [DOI]

Simon M, Simon A, Martins F, Botran L, Tisné S, Granier F, Loudet O, Camilleri C (2012). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. Plant J. 2012 Mar;69(6):1094-101. [DOI]

Viaud M, Adam-Blondon AF, Amselem J, Bally P, Cimerman A, Dalmais B, Lapalu N, Lebrun MH, Poinssot B, Pradier JM, Simon A (2012). Le génome de Botrytis décrypté. Revue des Oenologues, 142. [link]

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2011

Walker AS, Gautier AL, Confais J, Martinho D, Viaud M, Le Pêcheur P, Dupont J, Fournier E. Botrytis pseudocinerea, a new cryptic species causing gray mold in French vineyards in sympatry with Botrytis cinerea. Phytopathology. 2011 Dec;101(12):1433-45. [DOI]

Amselem J, Cuomo C, van Kan J, Viaud M, Benito E, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S, Fournier E, Gout L, Hahn M, Kohn L, Lapalu N, Plummer KM, Pradier JM, Quevillon E, Sharon A, Simon A, ten Have A, Tudzynski B, Tudzynski P, Wincker P, Andrew M, Beever R, Anthouard V, Beffa R, Benoit I, Bouzid O, Brault B, Chen Z, Choquer M, Collemare J, Cotton P, Danchin EG, Da Silva C, Gautier A, Giraud C, Giraud T, Gonzalez C, Grossetete S, Güldener U, Henrissat B, Howlett BJ, Kodira C, Kretschmer M, Lappartient A, Leroch M, Levis C, Mauceli E, Neuvéglise C, Oeser B, Pearson M, Poulain J, Poussereau N, Quesneville H, Rascle C, Schumacher J, Ségurens B, Sexton A, Sirven C, Soanes DM, Talbot NJ, Templeton M, Yandava C, Yarden O, Zeng Q, Rollins JA, Lebrun MA, Dickman MB. (2011). Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLoS Genetics. 2011 Aug;7(8):e1002230 [DOI]

Walker AS., Bouguennec A., Confais J., Morgant G., Leroux P. (2011). Evidence of host-range expansion from new powdery mildew (Blumeria graminis) infections of triticale (x triticosecale) in France. Plant Pathology (GB), vol 60 n°2, 207-220 [DOI]

Dalmais B, Schumacher J, Moraga J, Le Pêcheur P, Tudzynski B, Collado IG, Viaud M. (2011). The Botrytis cinerea phytotoxin botcinic acid requires two polyketide synthases for production and has a redundant role in virulence with botrydial. Molecular Plant Pathology. 2011 Aug;12(6):564-79 [DOI]

Rouxel T, Grandaubert J, Hane JK, Hoede C, van de Wouw AP, Couloux A, Dominguez V, Anthouard V, Bally P, Bourras S, Cozijnsen AJ, Ciuffetti LM, Degrave A, Dilmaghani A, Duret L, Fudal I, Goodwin SB, Gout L, Glaser N, Linglin J, Kema GH, Lapalu N, Lawrence CB, May K, Meyer M, Ollivier B, Poulain J, Schoch CL, Simon A, Spatafora JW, Stachowiak A, Turgeon BG, Tyler BM, Vincent D, Weissenbach J, Amselem J, Quesneville H, Oliver RP, Wincker P, Balesdent MH, Howlett BJ. (2011). Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations. Nat Commun. 2011 Feb;2:202. [DOI]

Micali, C.O., Neumann, U., Grunewald, D., Panstruga, R., & O’Connell, R. (2011) Biogenesis of a specialized plant‐fungal interface during host cell internalization of Golovinomyces orontii haustoria. Cellular Microbiology13: 210–226. [DOI]

Takahara H, Endl E, O’Connell R (2011) Isolation of fungal infection structures from plant tissue by flow cytometry for cell-specific transcriptome analysis. In "cDNA Libraries: Methods and Applications", pp. 3-13, Ed. by C. Lu, J. Browse and J. Wallis, Springer/Humana Press, Methods in Molecular Biology Series. [DOI]

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2010

Simon A, Biot E. (2010). ANAIS: Analysis of NimbleGen Arrays Interface. Bioinformatics 2010 Oct; 26(19):2468-9. [DOI]

Fujihara, N., Sakaguchi, A., Tanaka, S., Fujii, S., Tsuji, G., Shiraishi, T., O’Connell, R. & Kubo, Y. (2010) Peroxisome biogenesis factor PEX13 is required for appressorium‐mediated plant infection by the anthracnose fungus Colletotrichum orbiculare. Molecular Plant‐Microbe Interactions23: 436‐445. [DOI]

Tanaka S, Ichikawa A, Yamada K, Tsuji G, Nishiuchi T, Mori M, Koga H, Nishizawa Y, O’ConnellR, Kubo Y (2010) HvCEBiP, a gene homologous to rice chitin receptor CEBiP, contributes to basal resistance of barley to Magnaporthe oryzae. BMC Plant Biology 10: 288. [DOI]

Spanu PD, Abbott JC, Burgis TA, Ahmadinejad N, Ametz C, Amselem J, Barton GR, Benjdia M, Bidzinski P, Bindschedler LV, Both M, Brewer MT, Brown JKM, Butcher SA, Cadle‐Davidson L, Cadle‐Davidson MM, Collemare J, Cramer R, Francisco LJ, Frenkel O, Godfrey D, Gurr SJ, Harriman J, Hoede C, King BC, Klages S, Kleemann J, Knoll D, Koti PS, Kreplak J, Lebrun MH, Lu X, Maekawa T, Mahanil S, Milgroom MG, Montana G, Noir S, O’Connell RJ, Oberhänsli S, Parlange F, Pedersen C, Quesneville H, Reinhardt R, Ridout CJ, Rott M, Sacristán S, Schmidt SM, Schön M, Schulze‐Lefert P, Skamnioti P, Soanes DM, Sommer H, Stüber K, Takahara H, Talbot NJ, Thordal‐Christensen H, Ver Loren van Themaat E, Vigouroux M, Weßling R, Wicker T, Panstruga R (2010) Genome expansion and gene loss in powdery mildew fungi reveal functional trade‐offs in extreme parasitism. Science 330: 1543‐1546. [DOI]

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1995-2009
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